ReoID

Phylogenetic sequence analysis and improved diagnostic assay systems for viruses of the family Reoviridae

 

Edited by Peter. P. C. Mertens and Houssam Attoui

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Assigned IAH dsRNA-virus collection numbers for AHSV isolates

Please send any requests for isolates from this collection to peter.mertens@bbsrc.ac.uk

 

Reference 
AHSV strains
Reassortant and GM
AHSVstrains
AHSV-1 AHSV-2 AHSV-3 AHSV-4 AHSV-5 AHSV-6 AHSV-7 AHSV-8 AHSV-9 AHSV untyped or mixed types

 

AHSV-Untyped
SENvvvv/MV AHSV 1,2,3,4,5,6,7
SENvvv1/MV AHSV 1,2,3,4,5,6,7
UAEvvvv/MV - UAEvvvv/01 AHSV-2, 6, 7, 8
UAEvvvv/01 - (UAEvvv2/MV AHSV-1,3 & 4
ETH2010/23 AHSV-2 and AHSV-9
ETH2010/21

AHSV-2 and AHSV-9

ZIM2003/11 AHSV-untyped
RSA1960/01 AHSV-8 (plaque cloned)
but also gives positive rRT-PCR for AHSV-5
AHSV-1
                                     RSArah1/01
previously also identified as:  RSArrah/01
           AHSV-1   (Reference strain )
                                       RSArah1/02   AHSV-1   (Reference strain - plaque cloned )
Current Ref strain used at Pirbright   →   RSArah1/03  AHSV-1   (Reference strain - plaque cloned x3)
RSA1987/02 AHSV-1 (plaque cloned )
AHSV-2
                                       RSArah2/01
previously also identified as: RSArrah/02  
           AHSV-2   (Reference strain )
RSArah2/02  AHSV-2   (Reference strain - plaque cloned )
Current Ref strain used at Pirbright   →  RSArah2/03 AHSV-2   (Reference strain - plaque cloned x3)
ETH2010/22 AHSV-2
ETH2010/20 AHSV-2
ETH2010/02 AHSV-2
ETH2010/01 AHSV-2
GHA2010/05 AHSV-2
GHA2010/04 AHSV-2
GHA2010/03 AHSV-2
GHA2010/02 AHSV-2
GHA2010/01 AHSV-2
SEN2007/05 AHSV-2
SEN2007/04 AHSV-2
SEN2007/03 AHSV-2
SEN2007/01 AHSV-2
SEN2007/02 AHSV-2
AHSV-3

RSArrah/03

AHSV-3
RSArah3/03 AHSV-3
Current Ref strain used at Pirbright   →   RSArah3/03 AHSV-3 (Ref strain plaque cloned  x3  - monotypic)
RSArah3/02  AHSV-3  
 (Reference strain - plaque cloned )
AHSV-4

RSArrah/04

AHSV-4
RSArah4/02 AHSV-4   (Reference strain - plaque cloned )
Current Ref strain used at Pirbright   →  SPArah4/03 AHSV-4 plaque cloned (x3)  monotypic by RT-PCR
ETH2010/08 AHSV-4
ETH2010/07 AHSV-4
ETH2010/06 AHSV-4
ETH2010/05 AHSV-4
ETH2010/04 AHSV-4
ETH2010/03 AHSV-4
KEN2007/02 AHSV-4
KEN2007/01 AHSV-4
SPA1998/01 AHSV-4
SPA1987/02 AHSV-4
SPA1987/01 AHSV-4
RSA1938/01 AHSV-4 (vaccine strain plaque cloned)
AHSV-5
RSArrah/05 AHSV-5
Current Ref strain used at Pirbright   →  RSArah5/03 AHSV-5 plaque cloned (x3)  monotypic by RT-PCR
AHSV-6

RSArrah/06

AHSV-6
RSArah6/02 AHSV-6
Current Ref strain used at Pirbright   →  RSArah6/03 AHSV-6 plaque cloned (x3)  monotypic by RT-PCR
ETH2010/19 AHSV-6
AHSV-7

KENrrah/07

AHSV-7
KENrah7/02 AHSV-7 (Reference strain )
Current Ref strain used at Pirbright   →  KENrah7/03 AHSV-7 (Ref strain plaque cloned x3  - monotypic)
SEN2007/06 AHSV-7
ETH2010/09 AHSV-7
AHSV-8

RSArrah/08

AHSV-8
RSArah8/02 AHSV-8   (Reference strain - plaque cloned )
Current Ref strain used at Pirbright   →  RSArah8/03 AHSV-8 (Ref strain plaque cloned x3  - monotypic)
ETH2010/11 AHSV-8
ETH2010/10 AHSV-8
AHSV-9
Current Ref strain used at Pirbright   →  PAKrah9/03 AHSV-8 (Ref strain plaque cloned x3  - monotypic)
PAKrah9/02 AHSV-9   (Reference strain)
PAKrrah/09 AHSV-9    (Reference strain)
SENvvvv/09 AHSV-9 (vaccine)
SENvvv1/09 AHSV-9 (vaccine strain)
ETH2011/08

AHSV-9 

ETH2011/07 AHSV-9 
ETH2011/06 AHSV-9 
ETH2011/05 AHSV-9 
ETH2011/04 AHSV-9 
ETH2011/03 AHSV-9 
ETH2011/02 AHSV-9 
ETH2011/01 AHSV-9 
AHSV-9 2010
ETH2010/18 AHSV-9
ETH2010/17 AHSV-9
ETH2010/16 AHSV-9
ETH2010/15 AHSV-9
ETH2010/14 AHSV-9
ETH2010/13 AHSV-9
ETH2010/12 AHSV-9
GAM2009/04 AHSV-9
GAM2009/03 AHSV-9
GAM2009/02 AHSV-9
GAM2009/01 AHSV-9
KEN2006/01 AHSV-9
KEN2006/02 AHSV-9
PAKrrah/09 AHSV-9
SEN1998/01 AHSV-9
Reassortant and  rescued AHSV GM strains
AHSV-RV0001 Rescued AHSV-4 Vaccine strain
AHSV-RV0002 Rescued AHSV-4 Vaccine/T-VP2
AHSV-RV0045 AHSV ROH4 plaque purified
   
   

 

 
   

 

 

 


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